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SRX8955640: 20180731_RAD_Landmark
1 OXFORD_NANOPORE (MinION) run: 235,885 spots, 1.3G bases, 1,000.8Mb downloads

Design: HMW DNA stock was size selected by electrophoresis to remove smaller fragments. Size selected DNA was FFPE and end-repaired, followed by adapter ligation. Resulting library was sequenced on MinION instument.
Submitted by: University of Saskatchewan
Study: 10+ Genomes
show Abstracthide Abstract
Modern wheat cultivars carry a wide range of different genes associated with important traits, such as increased yield and disease resistance. It is impossible to capture all of these genes with a single genome sequence; therefore, additional genome sequences are required. Sequencing multiple wheat genomes will allow for the full complement of wheat genes to be identified, also called the 'pan genome'. The 'pan genome' can be subdivided into two components, the 'core genome' and the 'dispensable genome'. The 'core genome' encompasses genes that are common across most or all wheat, while the 'dispensable genome' includes genes that are present in only a subset of individuals or are unique to an individual. By capturing the 'pan', 'core', and 'dispensable' genome, wheat researchers and breeders will be better equipped to identify genes that can be used for improving wheat production and quality. It will also aid our understanding of gene-models and regulatory motifs.
Sample:
SAMN11841111 • SRS4871915 • All experiments • All runs
Library:
Name: 20180731_RAD_Landmark
Instrument: MinION
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 235,885 spots, 1.3G bases, 1,000.8Mb
Run# of Spots# of BasesSizePublished
SRR12461245235,8851.3G1,000.8Mb2020-08-21

ID:
11640362

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